Posts In Category Bioinformatics APIs

Using standardized bioinformatics formats in Taverna workflows for integrating biological data

on June 21, 2011 by Peter Li in Bioinformatics APIs, Data integration, Tutorials, Comments (0)

The field of bioinformatics is replete with standard formats for representing biological data. Those standards that have been successfully adopted by the bioinformatics community are associated with software tools […]

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Making use of JSON – a primer for small-time scripters

on by Tim Booth in Bioinformatics APIs, Tutorials, Comments (0)

Making use of JSON – a primer for small-time scripters Here I’ll introduce the JSON data representation format, with a contrived situation where it might be useful and some […]

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Accessing Ensembl using Ruby – the Core database

on by Jan Aerts in Bioinformatics APIs, Comments (2)

This tutorial describes how to use the Ruby API to the Ensembl Core database. It is part of a collection of 3 tutorials on the Ruby API to Ensembl. […]

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Accessing Ensembl using Ruby

on by Jan Aerts in Bioinformatics APIs, Comments (5)

This tutorial describes how to use the Ruby API to the Ensembl Core and Variation databases. It is intended as an introduction and demonstration of the general API concepts. […]

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